List of new names and new combinations previously effectively, but not validly, published

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1 International Journal of Systematic and Evolutionary Microbiology (), 63, 1 5 DOI /ijs Validation List no. 149 List of new names and new combinations previously effectively, but not validly, published Correspondence Jean Euzéby address can be found at The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists should send three copies of the pertinent reprint or photocopies thereof, or an electronic copy of the published paper, to the IJSEM Editorial Office for confirmation that all of the other requirements for valid publication have been met. It is also a requirement of IJSEM and the ICSP that authors of new species, new subspecies and new combinations provide evidence that types are deposited in two recognized culture collections in two different countries. It should be noted that the date of valid publication of these new names and combinations is the date of publication of this list, not the date of the original publication of the names and combinations. The authors of the new names and combinations are as given below, and these authors names will be included in the author index of the present issue. Inclusion of a name on these lists validates the publication of the name and thereby makes it available in bacteriological nomenclature. The inclusion of a name on this list is not to be construed as taxonomic acceptance of the taxon to which the name is applied. Indeed, some of these names may, in time, be shown to be synonyms, or the organisms may be transferred to another genus, thus necessitating the creation of a new combination. Acetatifactor Pfeiffer et al. gen. nov. Acetatifactor muris Pfeiffer et al Acetatifactor muris Pfeiffer et al. sp. nov. Strain CT-m2 (5DSM ATCC BAA ) Acetobacter okinawensis Iino et al. d sp. nov. Strain 1-35 (5JCM LMG 26457) 13 9 Acetobacter papayae Iino et al. sp. nov. Strain 1-25 (5JCM LMG 26456) 13 9 Acetobacter persici corrig. Iino et al. # sp. nov. Strain T-120 (5JCM LMG 26458) 13 9 Bacillus rhizosphaerae Madhaiyan et al. sp. nov. Strain SC-N012 (5DSM NCCB ) Burkholderia denitrificans Lee et al. sp. nov. Strain KIS30-44 (5KACC DSM ) Caenimonas terrae Kim et al. sp. nov. Strain SGM1-15 (5KACC NBRC ) Chryseobacterium tructae Zamora et al. sp. nov. Strain (5CECT 77985CCUG ) Cruoricaptor Yassin et al. gen. nov. Cruoricaptor ignavus Yassin et al Cruoricaptor ignavus Yassin et al. sp. nov. Strain IMMIB L (5DSM CCUG 62025) Defluviimonas Foesel et al. gen. nov. Defluviimonas denitrificans Foesel et al. 6 5 Defluviimonas denitrificans Foesel et al. sp. nov. Strain D9-3 (5DSM ATCC BAA ) Desulfobulbus marinus Kuever et al. sp. nov. Strain 3pr10 (5DSM 20585JCM 13489)** 1 11 Desulfovibrio capillatus Miranda-Tello sp. nov. Strain MET2 (5DSM149825CIP107483) 7 17 et al. Desulfovibrio legallii corrig. Thabet et al. DD sp. nov. Strain H 1 (5DSM CCUG 54389) G IUMS Printed in Great Britain 1

2 Ferrovibrio Sorokina et al. gen. nov. Ferrovibrio denitrificans Sorokina et al dd Ferrovibrio denitrificans Sorokina et al. sp. nov. Strain Sp-1 (5LMG VKM B-2673) 2 24 Gibbsiella dentisursi Saito et al. sp. nov. Strain NUM 1720 (5JCM DSMZ ) Komagataeibacter Yamada et al. gen. nov. Komagataeibacter xylinus (Brown 1886) Yamada et al. Komagataeibacter europaeus (Sievers et al. 1992) Yamada et al. (basonym Acetobacter europaeus Sievers et al. 1992) Strain DSM 6160 (5JCM BCC 36446) Komagataeibacter hansenii (Gosselé et al. 1983) Yamada et al. (basonym Acetobacter hansenii Gosselé et al. 1983) Komagataeibacter intermedius (Boesch et al. 1998) Yamada et al. (basonym Acetobacter intermedius Boesch et al. 1998) Komagataeibacter kombuchae (Dutta and Gachhui 2007) Yamada et al. (basonym Gluconacetobacter kombuchae Dutta and Gachhui 2007) Komagataeibacter nataicola (Lisdiyanti et al. 2006) Yamada et al. (basonym Gluconacetobacter nataicola Lisdiyanti et al. 2006) Komagataeibacter oboediens (Sokollek et al. 1998) Yamada et al. (basonym Acetobacter oboediens Sokollek et al. 1998) Komagataeibacter rhaeticus (Dellaglio et al. 2005) Yamada et al. (basonym Gluconacetobacter rhaeticus Dellaglio et al. 2005) Komagataeibacter saccharivorans (Lisdiyanti et al. 2006) Yamada et al. (basonym Gluconacetobacter saccharivorans Lisdiyanti et al. 2006) Komagataeibacter sucrofermentans (Toyosaki et al. 1996) Yamada et al. (basonym Acetobacter xylinus subsp. sucrofermentans corrig. Toyosaki et al. 1996) Komagataeibacter swingsii (Dellaglio et al. 2005) Yamada et al. (basonym Gluconacetobacter swingsii Dellaglio et al. 2005) Komagataeibacter xylinus (Brown 1886) Yamada et al. basonym Acetobacter aceti subsp. xylinus corrig. (Brown 1886) De Ley and Frateur 1974 (Approved Lists 1980) Strain NCIMB 8746 (5NBRC JCM 76435BCC 63185DSM 56025LMG 1527) Strain DSM (5JCM BCC LMG 18909) Strain LMG (5NBRC MTCC 6913) Strain LMG 1536 (5JCM BCC 36443) Strain DSM (5JCM BCC LMG 18849) Strain LMG (5JCM BCC DSM 16663) Strain LMG 1582 (5JCM BCC 36444) Strain LMG JCM 97305BCC 7227) Strain LMG (5JCM BCC DSM 16373) Strain NCIMB (5NBRC JCM 76445DSM 65135LMG 1515)## Lihuaxuella Yu et al. gen. nov. Lihuaxuella thermophila Yu et al Lihuaxuella thermophila Yu et al. sp. nov. Strain YIM (5CCTCC AA JCM 18059) Luteimicrobium album Hamada et al. sp. nov. Strain RI148-Li105 (5NBRC DSM 24866) International Journal of Systematic and Evolutionary Microbiology 63

3 Lysobacter thermophilus Wei et al. sp. nov. Strain YIM (5CCTCC AB KCTC 32020) Mesotoga Nesbø et al. *** gen. nov. Mesotoga prima Nesbø et al Mesotoga prima Nesbø et al. DDD sp. nov. Strain MesG1.Ag.4.2 (5DSM ATCC BAA-2239)ddd Methylobacterium dankookense Lee et al. sp. nov. Strain SW08-7 (5KCTC DSM ) Methylobacterium soli Cao et al. sp. nov. Strain YIM (5CCTCC AA KCTC 22810) Nonlabens marinus Park et al. sp. nov. Strain S1-08 (5KCTC NBRC 19 20, ) Paenibacillus thermophilus Zhou et al. sp. nov. Strain WP-1 (5DSM JCM CCTCC AB ) Pararhodobacter Foesel et al. gen. nov. Pararhodobacter aggregans Foesel et al. 6 5 Pararhodobacter aggregans Foesel et al. sp. nov. Strain D1-19 (5DSM ATCC 6 5 BAA-1446) Peptoniphilus coxii Citron et al. sp. nov. Strain RMA (5JCM CCUG ATCC BAA-2106) Peptoniphilus tyrrelliae Citron et al. sp. nov. Strain RMA (5JCM CCUG ATCC BAA-2105) Rubellimicrobium roseum Cao et al. sp. nov. Strain YIM (5CCTCC AA KCTC 23202) Ruegeria arenilitoris Park and Yoon sp. nov. Strain G-M8 (5KCTC CCUG ) Saccharopolyspora lacisalsi Guan et al. sp. nov. Strain TRM (5KCTC CCTCC AA ) Shewanella litorisediminis Lee and Yoon sp. nov. Strain SMK1-12 (5KCTC CCUG ) Shivajiella Anil Kumar et al. gen. nov. Shivajiella indica Anil Kumar et al Shivajiella indica Anil Kumar et al. sp. nov. Strain NIO-S1 (5S15KCTC MTCC ) Siansivirga Hameed et al. gen. nov. Siansivirga zeaxanthinifaciens Hameed et al Siansivirga zeaxanthinifaciens Hameed sp. nov. Strain CC-SAMT-1 (5BCRC JCM 26 8 et al ) Vibrio aestivus Lucena et al. sp. nov. Strain M22 (5CECT 75585CAIM KCTC 23860) Vibrio quintilis Lucena et al. sp. nov. Strain M62 (5CECT 77345CAIM KCTC 23833) Virgibacillus albus Zhang et al. sp. nov. Strain YIM (5DSM JCM 17364) For references to Validation Lists 1 71, see Int J Syst Bacteriol 49 (1999) Lists were published in Int J Syst Evol Microbiol 50 (2000) 3, 423, 949, 1415, 1699, 1953; and 51 (2001) 1, 263, 793, 1229, 1619, 1945; and 52 (2002) 3, 685, 1075, 1437, 1915; and 53 (2003) 1, 373, 627, 935, 1219, 1701; and 54 (2004) 1, 307, 631, 1005, 1425, 1909; and 55 (2005) 1, 547, 983, 1395, 1743, 2235; and 56 (2006) 1, 499, 925, 1459, 2025, 2507; and 57 (2007) 1, 433, 893, 1371, 1933, 2449; and 58 (2008) 1, 529, 1057, 1511, 1993, 2471; and 59 (2009) 1, 451, 923, 1555, 2129, 2647; and 60 (2010) 1, 469, 1009, 1477, 1985, 2509; 61 (2011) 1, 475,1011, 1499, 2025, 2563; and 62 (2012) 1, 473, 1017, 1443, 2045, *Abbreviations of culture collections cited in this list can be found at DPriority number assigned according to the date the documentation and request for validation are received. dthe correct etymology of the epithet should be the following: o.ki.na.wen9sis. N.L. masc. adj. okinawensis of or belonging to Okinawa, from where the type strain was isolated. The culture collection accession number NRIC 0658 is also cited in the effective publication, but the authors did not provide evidence that the type strain is deposited in this collection. The correct etymology of the epithet should be the following: pa.pa9ya.e. N.L. gen. n. papayae of a papaya fruit, from which the type strain was isolated. The culture collection accession number NRIC 0655 is also cited in the effective publication, but the authors did not provide evidence that the 3

4 #The original spelling of the specific epithet, persicus (sic), has been corrected on validation according to Rule 61. The etymology is the following: per9si.ci. L. n. persicum a peach fruit; L. gen. n. persici of a peach fruit, from which the type strain was isolated. **The culture collection accession number JCM has been provided at the time of request for valid publication of the name. DDThe original spelling of the specific epithet, legallis (sic), has been corrected on validation according to Rule 61. The etymology is the following: le.gal.li9i. N.L. gen. masc. n. legallii of LeGall, named in honour and in memory of the French microbiologist and biochemist Pr. Jean LeGall (Department of Biochemistry, University of Georgia, Athens, USA), who greatly stimulated research on dissimilatory sulfate reduction. ddthe type species is not cited in the species description (protologue). However, according to Rule 20c the type strain must be Ferrovibrio denitrificans Sorokina et al.. The culture collection accession number NRIC 0616 is also cited in the effective publication, but the authors did not provide evidence that the The culture collection accession number NRIC 0614 is also cited in the effective publication, but the authors did not provide evidence that the The strain DSM 15973, also cited in the effective publication, does not appear in the DSMZ website. ##The strain BCC 49175, also cited in the effective publication, does not appear in the BCC website. ***The correct etymology of the genus name should be the following: Me.so.to9ga. Gr. adj. mesos middle; L. fem. n. toga Roman outer garment; N.L. fem. n. Mesotoga a garment in the middle, referring to its moderate optimal growth temperature and the presence of a toga -like sheath. DDDThe correct etymology of the epithet should be the following: pri9ma. L. fem. adj. prima first, referring to the fact that this is the first characterized and named mesophilic representative of the order Thermotogales. dddthe culture collection accession number ATCC BAA-2239 has been provided at the time of request for valid publication of the name. The correct epithet was provided by the way of an erratum (see reference 21). The etymology is the following: ma.ri9nus. L. masc. adj. marinus of the sea, marine. The epithet tyrrelliae is not in accordance with the Recommendation 6(10) of the Bacteriological Code. References 1. Anil Kumar, P., Aravind, R., Francis, K., Bhumika, V., Ritika, C., Priyashanth, P. & Srinivas, T. N. R. (2012). Shivajiella indica gen. nov., sp. nov., a marine bacterium of the family Cyclobacteriaceae with nitrate reducing activity. Syst Appl Microbiol 35, Cao, Y.-R., Jiang, Y., Wang, Q., Tang, S.-K., He, W.-X., Xue, Q.-H., Xu, L.-H. & Jiang, C.-L. (2010). Rubellimicrobium roseum sp. nov., a Gram-negative bacterium isolated from the forest soil sample. Antonie van Leeuwenhoek 98, Cao, Y.-R., Wang, Q., Jin, R.-X., Tang, S.-K., Jiang, Y., He, W.-X., Lai, H.-X., Xu, L.-H. & Jiang, C.-L. (2011). Methylobacterium soli sp. nov. a methanol-utilizing bacterium isolated from the forest soil. Antonie van Leeuwenhoek 99, Citron, D. M., Tyrrell, K. L. & Goldstein, E. J. C. (2012). Peptoniphilus coxii sp. nov. and Peptoniphilus tyrrelliae sp. nov. isolated from human clinical infections. Anaerobe 18, Foesel, B. U., Drake, H. L. & Schramm, A. (2011). Defluviimonas denitrificans gen. nov., sp. nov., and Pararhodobacter aggregans gen. nov., sp. nov., non-phototrophic Rhodobacteraceae from the biofilter of a marine aquaculture. Syst Appl Microbiol 34, Guan, T.-W., Wu, N., Xia, Z.-F., Ruan, J.-S., Zhang, X.-P., Huang, Y. & Zhang, L. L. (2011). Saccharopolyspora lacisalsi sp. nov., a novel halophilic actinomycete isolated from a salt lake in Xinjiang, China. Extremophiles 15, Hamada, M., Yamamura, H., Komukai, C., Tamura, T., Suzuki, K.-i. & Hayakawa, M. (2012). Luteimicrobium album sp. nov., a novel actinobacterium isolated from a lichen collected in Japan, and emended description of the genus Luteimicrobium. J Antibiot (Tokyo) 65, Hameed, A., Shahina, M., Lin, S.-Y., Sridhar, K. R., Young, L.-S., Lee, M.-R., Chen, W.-M., Chou, J.-H. & Young, C.-C. (2012). Siansivirga zeaxanthinifaciens gen. nov., sp. nov., a novel zeaxanthin-producing member of the family Flavobacteriaceae isolated from coastal seawater of Taiwan. FEMS Microbiol Lett 333, Iino, T., Suzuki, R., Kosako, Y., Ohkuma, M., Komagata, K. & Uchimura, T. (2012). Acetobacter okinawensis sp. nov., Acetobacter papayae sp. nov., and Acetobacter persicus sp. nov.; novel acetic acid bacteria isolated from stems of sugarcane, fruits, and a flower in Japan. J Gen Appl Microbiol 58, Kim, S.-J., Weon, H.-Y., Kim, Y.-S., Moon, J. Y., Seok, S. J., Hong, S.-B. & Kwon, S. W. (2012). Caenimonas terrae sp. nov., isolated from a soil sample in Korea, and emended description of the genus Caenimonas Ryu et al J Microbiol 50, Kuever, J., Rainey, F. A. & Widdel, F. (2005). Genus I. Desulfobulbus Widdel 1981, 382 VP (Effective publication: Widdel 1980, 374). In Bergey s Manual of Systematic Bacteriology. The Proteobacteria part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), 2nd edn, vol. 2, pp Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer. 12. Lee, C.-M., Weon, H.-Y., Yoon, S.-H., Kim, S.-J., Koo, B.-S. & Kwon, S.-W. (2012). Burkholderia denitrificans sp. nov., isolated from the soil of Dokdo Island, Korea. J Microbiol 50, Lee, M.-H. & Yoon, J.-H. (2012). Shewanella litorisediminis sp. nov., a gammaproteobacterium isolated from a tidal flat sediment. Antonie van Leeuwenhoek 102, Lee, S.-W., Oh, H.-W., Lee, K.-H. & Ahn, T.-Y. (2009). Methylobacterium dankookense sp. nov., isolated from drinking water. J Microbiol 47, Lucena, T., Ruvira, M. A., Arahal, D. R., Macián, M. C. & Pujalte, M. J. (2012). Vibrio aestivus sp. nov. and Vibrio quintilis sp. nov., related to Marisflavi and Gazogenes clades, respectively. Syst Appl Microbiol 35, Madhaiyan, M., Poonguzhali, S., Lee, J.-S., Lee, K.-C. & Hari, K. (2011). Bacillus rhizosphaerae sp. nov., an novel diazotrophic bacterium isolated from sugarcane rhizosphere soil. Antonie van Leeuwenhoek 100, Miranda-Tello, E., Fardeau, M.-L., Fernández, L., Ramírez, F., Cayol, J.-L., Thomas, P., Garcia, J.-L. & Ollivier, B. (2003). 4 International Journal of Systematic and Evolutionary Microbiology 63

5 Desulfovibrio capillatus sp. nov., a novel sulfate-reducing bacterium isolated from an oil field separator located in the Gulf of Mexico. Anaerobe 9, Nesbø, C. L., Bradnan, D. M., Adebusuyi, A., Dlutek, M., Petrus, A. K., Foght, J., Doolittle, W. F. & Noll, K. M. (2012). Mesotoga prima gen. nov., sp. nov., the first described mesophilic species of the Thermotogales. Extremophiles 16, Park, S. & Yoon, J.-H. (2012). Ruegeria arenilitoris sp. nov., isolated from the seashore sand around a seaweed farm. Antonie van Leeuwenhoek 102, Park, S., Yoshizawa, S., Chiura, H. X., Muramatsu, Y., Nakagawa, Y., Kogure, K. & Yokota, A. (2012). Nonlabens marina sp. nov., a novel member of the Flavobacteriaceae isolated from the Pacific Ocean. Antonie van Leeuwenhoek 102, Park, S., Yoshizawa, S., Chiura, H. X., Muramatsu, Y., Nakagawa, Y., Kogure, K. & Yokota, A. (2012). Erratum to: Nonlabens marina sp. nov., a novel member of the Flavobacteriaceae isolated from the Pacific Ocean. Antonie van Leeuwenhoek 102, Pfeiffer, N., Desmarchelier, C., Blaut, M., Daniel, H., Haller, D. & Clavel, T. (2012). Acetatifactor muris gen. nov., sp. nov., a novel bacterium isolated from the intestine of an obese mouse. Arch Microbiol 194, Saito, M., Shinozaki-Kuwahara, N. & Takada, K. (2012). Gibbsiella dentisursi sp. nov., isolated from the bear oral cavity. Microbiol Immunol 56, Sorokina, A. Y., Chernousova, E. Y. & Dubinina, G. A. (2012). Ferrovibrio denitrificans gen. nov., sp. nov., a novel neutrophilic facultative anaerobic Fe(II)-oxidizing bacterium. FEMS Microbiol Lett 335, Thabet, O. B. D., Wafa, T., Eltaief, K., Cayol, J.-L., Hamdi, M., Fauque, G. & Fardeau, M.-L. (2011). Desulfovibrio legallis sp. nov.: a moderately halophilic, sulfate-reducing bacterium isolated from a wastewater digestor in Tunisia. Curr Microbiol 62, Wei, D.-Q., Yu, T.-T., Yao, J.-C., Zhou, E.-M., Song, Z.-Q., Yin, Y.-R., Ming, H., Tang, S.-K. & Li, W.-J. (2012). Lysobacter thermophilus sp. nov., isolated from a geothermal soil sample in Tengchong, south-west China. Antonie van Leeuwenhoek 102, Yamada, Y., Yukphan, P., Lan Vu, H. T., Muramatsu, Y., Ochaikul, D., Tanasupawat, S. & Nakagawa, Y. (2012). Description of Komagataeibacter gen. nov., with proposals of new combinations (Acetobacteraceae). J Gen Appl Microbiol 58, Yassin, A. F., Inglis, T. J. J., Hupfer, H., Siering, C., Schumann, P., Busse, H.-J. & Aravena-Román, M. (2012). Cruoricaptor ignavus gen. nov., sp. nov., a novel bacterium of the family Flavobacteriaceae isolated from blood culture of a man with bacteraemia. Syst Appl Microbiol 35, Yu, T.-T., Zhang, B.-H., Yao, J.-C., Tang, S.-K., Zhou, E.-M., Yin, Y.-R., Wei, D.-Q., Ming, H. & Li, W.-J. (2012). Lihuaxuella thermophila gen. nov., sp. nov., isolated from a geothermal soil sample in Tengchong, Yunnan, south-west China. Antonie van Leeuwenhoek 102, Zamora, L., Vela, A. I., Palacios, M. A., Sánchez-Porro, C., Moore, E. R. B., Domínguez, L., Ventosa, A. & Fernández-Garayzábal, J. F. (2012). Chryseobacterium tructae sp. nov., isolated from rainbow trout (Oncorhynchus mykiss). Syst Appl Microbiol 35, Zhang, Y.-J., Zhou, Y., Ja, M., Shi, R., Chun-Yu, W.-X., Yang, L.-L., Tang, S.-K. & Li, W.-J. (2012). Virgibacillus albus sp. nov., a novel moderately halophilic bacterium isolated from Lop Nur salt lake in Xinjiang province, China. Antonie van Leeuwenhoek 102, Zhou, Y., Gao, S., Wei, D.-Q., Yang, L.-L., Huang, X., He, J., Zhang, Y.-J., Tang, S.-K. & Li, W.-J. (2012). Paenibacillus thermophilus sp. nov., a novel bacterium isolated from a sediment of hot spring in Fujian province, China. Antonie van Leeuwenhoek 102,