Original article Bacteriological profile and antibiotic susceptibility patterns in neonatal septicemia in view of emerging drug resistance

Transcription

1 J M e d A l l i e d S c i ; 4 ( 1 ) : 2-8 w w w. j m a s. i n P r i n t I S S N : O n l i n e I S S N : X Journal of Medical & Allied Sciences Original article Bacteriological profile and antibiotic susceptibility patterns in neonatal septicemia in view of emerging drug resistance Maimoona Mustafa and Syed Laeeq Ahmed Department of Microbiology, Deccan College of Medical Sciences, Kanchanbagh, Hyderabad-558, Andhra Pradesh, India. Article history: Abstract Received 22 October 213 Accepted 1 January 2 Early online 25 February 2 Print 28 February 2 Corresponding author Maimoona Mustafa Professor & HOD, Department of Microbiology, Deccan College of Medical Sciences, Kanchanbagh, Hyderabad-558, Andhra Pradesh, India. Phone: Fax: maimoonamustafa@gmail.com The objective of this study was to isolate pathogenic bacteria in neonatal septicaemia cases, and to know their antibiograms. Under aseptic precautions, blood was drawn from neonates with suspected septicaemia and inoculated in BHI broth. Isolates obtained were identified as per standard protocol and antibiotic susceptibility was done by Kirby Bauer disc diffusion method (as per CLSI guidelines). A total number of 62 (44.2%) patients had positive blood cultures. The most common pathogens isolated were Klebsiella pneumoniae (n=22, 35%) followed by Staphylococcus aureus (n=, 24.1%), Escherichia coli (n=, 22.5%), CONS (n=7, 11.2%) and Pseudomonas aeruginosa (n=4, 6.4%). The Gram negative organisms showed high resistance to commonly used antibiotics and were highly sensitive to Meropenem. The Gram positive bacteria showed high resistance to Ampicillin, Erythromycin and Amoxycillin; but they were highly susceptible to Linizolid and Vancomycin. As the Gram negative organisms were the most common isolates in neonatal septicaemia, their resistance pattern should be considered essential for deciding the empirical treatment. Prompt treatment of neonatal sepsis with judicious use of appropriate antibiotics can minimize the morbidity and mortality, besides reducing the emergence of multi-drug resistant organisms in ICU s. Key words: coagulase negative Staphylococcus (CONS), drug susceptibility, early onset septicemia, late onset septicemia, neonatal septicaemia 2 Deccan College of Medical Sciences. All rights reserved. Neonatal sepsis refers to systemic and generalized bacterial infection of the newborn documented by a positive blood culture in the first 4 weeks of life, and is one of the four leading causes of neonatal mortality in India 1. It is characterized by variable systemic physiologic changes triggered by infection, which continues to provide an extraordinary challenge to clinicians who manage critically ill neonates and children 2. Not surprisingly, sepsis is the commonest admitting diagnosis among neonates at referral facilities 3, and is a medical emergency that requires urgent rational antibiotic therapy 4, so as to minimize the risk of severe morbidity and mortality besides reducing the emergence of multi-drug resistant organism in ICU s. The gold standard for diagnosis of septicemia is the isolation of bacterial agent from blood culture 4. 2

2 Mustafa M et al. Many infections in the neonatal and pediatric age group can only be established on the basis of etiological agent recovered from blood 3, but a negative blood culture does not rule out the possibility of neonatal sepsis 1. The prevalence of bacterial profile of blood cultures and their susceptibility patterns in an area, provide guidance to start empirical treatment which is the cornerstone in the management of sepsis. Therefore, the present study was aimed at determining the bacteriological profile and their antimicrobial susceptibility patterns in neonatal septicemia cases. Materials and methods Study centre, design and period This study involved clinically suspected cases of septicemia among 43 neonates admitted and born during the study period in a teaching hospital at Hyderabad. The cases were categorized depending upon the time of presentation, within 72 hours of life as early onset septicemia (EOS) and after 72 hours of life as late onset septicemia (LOS). Institutional Ethics Committee Clearance and informed consent from all parents of the neonates under study were obtained. Subject selection Inclusion criteria: Neonates having features suggestive of systemic inflammatory response syndrome (SIRS), with no localizing source of infection. Neonates with poor activity, fever, refusal of feed, lethargy, tachypnea, tachycardia, birth asphyxia, prematurity, low birth weight, or delivered with PROM, foul smelling liquor, etc. Exclusion criteria: Neonates having extreme prematurity (less than 3 weeks of gestational age), birth weight less than gm, gross congenital anomalies, and all children who had received antibiotics before admission, were excluded from the study. Sample collection and processing With all aseptic precautions about 1-2 ml of blood was drawn from each neonate 5,6. About 1 ml of blood was inoculated into ml of brain heart infusion (BHI) broth and processed as per the protocol 5,6 and incubated for one week at 37 C 7 and was checked daily for evidence of bacterial growth. For positive broth cultures, subcultures were done next day on blood agar, Mac Conkey s agar and chocolate agar and were incubated at 37 C for 24 hours. If no growth occurred on plates after 24 hours, subsequent cultures were done on 2 nd, 3 rd, 5 th and 7 th day. The grown bacteria were identified by colony morphology, Gram stain and standard biochemical tests 5,7. A second blood culture was processed in cases where coagulase negative Staphylococcus (CONS) was isolated 8. The antibiotic susceptibility testing was performed by Kirby-Bauer disc diffusion method for the bacterial isolates, as per Clinical and Laboratory Standards Institute guideline (CLSI). ATCC control strains were used accordingly as per standard procedures. The antibiotic disks (Himedia Co., Mumbai, India) and their concentrations per disk (μg) comprised: Ampicillin (), Cefotaxime (3), Gentamicin (), Amikacin (3), Ciprofloxacin (5), Vancomycin (3), Piperacillin (), Meropenem (), Ceftriaxone (3), Ceftazidime (3), Amoxycillin (3), Erythromycin (), Cefoperazone (75), Cefoxitin (3), Colistin (), Linezolid (3), Cefpodoxime (). Gram negative bacteria resistant to third generation cephalosporins were tested for ESBL production by disc potentiation test using Ceftazidime/Clavulanic acid (3μg/μg) discs with plain Ceftazidime (3μg) disc and interpreted as per the standard protocol 9. Data analysis The data of all neonatal septicemia cases was tabulated using Microsoft Office computer software. The Chi-square test was used in assessing the association between variables. A p-value of.5 or less was considered statistically significant. Results Table 1: Blood culture positivity Blood cultures Positive Negative Male Female n (%) 38(61.2%) 24(38.7%) 62(44.2%) 34(43.5%) 44(56.4%) 78(55.7%) The total number of culture positive cases was found to be 62 giving the culture positivity rate of 44.28% (Table 1). Among the culture positives, 38 (61%) were male and 24 (38.7%) were female 3

3 Number of isolates Age of onset Mustafa M et al. neonates, giving the male to female ratio of 1.58:1 (Table 1). Table 2: Distribution of cases according to age of onset and culture positivity Age of onset positive negative EOS 36 (58%) 3 (38.5%) 66 LOS 26 (42%) 48 (61.5%) EOS LOS Fig 1. Distribution of cases according to age of onset and culture positivity Age of onset and culture positivity positive negative Bacterial isolates in blood cultures Table 3: Bacterial isolates in blood cultures Organisms EOS LOS Klebsiella pneumoniae Staphylococcus aureus Escherichia coli CONS Pseudomonas aeruginosa (38.8%) 9 (25%) (27.7%) 2 (5.6%) 1 (2.8%) 8 (3.7%) 6 (23.1%) 4 (.4%) 5 (19.2%) 3 (11.5%) n(%) 22 (35.4%) (24.2%) (22.5%) 7 (11.3%) 4 (6.5%) Table 4A: Showing antibiotic sensitivity pattern of the Gram positive bacterial isolates Antibiotics Staphylococcus aureus () Coagulase negative Staphylococcus (7) Ampicillin 2(13.3%) 1(.2%) Amikacin (66.6%) 5(71.4%) 11(73.3%) 4(57%) 7(46%) 3(43%) 9(6%) 5(71.4%) 11(73.3%) 5(71.4%) (22) 3 (13.6%) (68%) (68%) (45%) (63%) 16 (73%) 5(33.3%) 3(42.8%) 8 (36%) Cefoxitin 12(8%) 6(85%) Ceftriaxone Gentamicin Ciprofloxacin Cefotaxime Erythromycin Amoxycillin Vancomycin Cefoperazone 8(53.3%) 3(42.8%) (93.3%) 7(%) 9(6%) 5(71.4%) Linezolid (%) 7(%) 18 (82%) 11 (5%) 21 (95%) (63%) 22 (%) The age of culture positive neonates ranged from 12 hours to 28 days. Among culture positive neonates, 36 (58%) were having EOS and 26 (42%) were having LOS (Table 2, Fig1). Fig 2. Bacterial isolates in blood cultures 4

4 Antibiotic sensitivity Mustafa M et al. Antibiotic sensitivity pattern of the Gram positive bacterial isolates Ampicillin Amikacin Ceftriaxone Gentamicin Ciprofloxacin Cefotaxime Erythromycin Cefoxitin Amoxycillin Vancomycin Cefoperazone Linezolid Staphylococcus aureus Coagulase negative Staphylococcus Fig 3A. Showing antibiotic sensitivity pattern of the Gram positive bacterial isolates Table 4B: Showing antibiotic sensitivity pattern of the Gram negative bacterial isolates Antibiotics Klebsiella pneumonia (22) N (%) Escherichia coli () N (%) Pseudom. aeruginosa (4) N (%) (4) Ampicillin 2(9%) 1(7.1%) 3(7.5%) Amikacin (68.1%) (71.4%) 2(5%) 27(68%) Cefotaxime 11(5%) 8(57%) 1(25%) 2(5%) Gentamicin (45.4%) 7(5%) 1(25%) 18(45%) Ciprofloxacin 16(72.7%) (71.4%) 2(5%) 28(7%) Cefpodoxime 9(41%) 7(5%) 1(25%) 17(42.5%) Ceftazidime 12(54.5%) 8(57%) 2(5%) 22(55%) Piperacillin (45.4%) 7(5%) 1(25%) 18(45%) Meropenem 22(%) (%) 4(%) 4(%) Cefoperazone 11(5%) 7(5%) 1(25%) 19(47.5%) Colistin 22(%) (%) 4(%) 4(%) Ceftriaxone (45.4%) 7(5%) 1(25%) 18(45%)

5 Antibiotic sensitivity Mustafa M et al. Antibiotic sensitivity pattern of the Gram negative bacterial isolates Ampicillin Amikacin Cefotaxime Gentamicin Ciprofloxacin Cefpodoxime Ceftazidime Piperacillin Meropenem Cefoperazone Colistin Ceftriaxone Klebsiella pneumonia Escherichia coli Pseudomonas aeruginosa Fig 3B. Showing antibiotic sensitivity pattern of the Gram negative bacterial isolates Gram negative organisms were more than Gram positive organisms, constituting about 65% of total isolates (Fig 2 and Table 3). The isolated Gram positive bacteria showed high resistance to Ampicillin (n=3, 13.6%) and considerable resistance towards Gentamicin (n=, 45%). They showed moderate susceptibility to third generation Cephalosporin (Cefotaxime-73%, Ceftriaxone-68%, Cefoperazone-63%), Amikacin-68%, and Ciprofloxacin-63%. They were highly susceptible to Linezolid (n=22, %) and Vancomycin (n=21, 95%) (Table 4A, Fig 3A). Among the Gram negative bacteria, many of them were resistant to ampicillin (7.5%), gentamicin (45%), third generation cephalosporins (ceftazidime-55%, cefotaxime-5%, ceftriaxone-45%) and piperacillin (45%). They were moderately susceptible to Amikacin (68%) and ciprofloxacin (7%), but highly susceptible to Colistin (%) and Meropenem (%) (Table 4B, Fig 3B). The ESBL producers were detected in 6 (27%) of Klebsiella pneumoniae and 3 (21%) of Escherichia coli isolates. Discussion There were 43 live births during the study period, of which neonates were clinically diagnosed with septicemia. Among them 62 (44.2%) were blood culture positive. This was in concordance with the other studies by Roy I et al 11 and Kayange N et al 12. The incidence of culture-proven neonatal septicemia was.4 per live births. This was comparable to the study done by Karthikeyan et al 13. The incidence of neonatal septicemia is variable and differs from place to place, because it depends on various factors like gestational age, fetal birth weight, maternal nutrition, perinatal care and hygienic conditions, child health care facilities, etc. In the present study, males were more affected than females, and the male to female ratio was 1.58:1. This is comparable to the other studies by Begum S et al and Shrestha NJ et al. The reason for male preponderance is unknown, but this could be due to sex-dependent factors 16. The synthesis of gamma globulins is probably regulated by X linked immunoregulatory genes and as males are having one X chromosome, they are more prone for neonatal septicemia than females 17. In our study, early onset septicemia (58%) was more than late onset septicemia (42%), which is consistent with the studies of Aletayab et al 16, Waseem R et al 18 and Al-Shamahy et al 19. This could be due to prematurity, low birth weight and unhy- 6

6 Mustafa M et al. gienic conditions during labor. On the contrary, other studies done by Kayange N et al 12 and Karambin MM et al 2 reported higher occurrence of late onset septicemia than early onset septicemia. The organisms causing neonatal septicaemia differ from area to area and also change with respect to time even in the same area, which may be due to different life conditions 21. Gram negative bacterial isolates (65%) were more than Gram positive isolates (35%) in our study. This is in contrast to developed countries, where Gram positive bacteria were more commonly reported. This was in concordance with National Neonatal Perinatal Database (NNPD) (23) 22, Aletayeb SMH et al 16, and Sundaram V et al 23. In this study, the most frequent isolate was Klebsiella pneumonia 22 (35.4%) in both EOS and LOS. This was in accordance with other Indian studies NNPD 23 22, Kumar GD et al 24, Roy I et al 11 and Kayange N et al 12. Escherichia coli was the second most common Gram negative organism followed by Pseudomonas aeruginosa. Staphylococcus aureus was the commonest Gram positive organism and was second most common organism among all isolates. Among the isolates, a considerable percentage (11%) was CONS as pathogen, which could be due to immature immune system development, and a large population of premature and debilitated infants. In this study, Pseudomonas aeruginosa isolates were found to be highly resistant to routinely used antibiotics, followed by Klebsiella pneumoniae and Escherichia coli. This increasing resistance could be due to irrational use of antibiotics 25. All Gram negative isolates were having considerable sensitivity to Amikacin and Ciprofloxacin; but were highly susceptible to Meropenem (%) and Colistin (%). Our study findings correlated well with the findings of others viz. Aletayeb SMH et al 16, Waseem R et al 18, Mane AK et al 3 and Mutlu M et al 26. The ESBL producers were detected in 27% of Klebsiella pneumoniae and 21% of Escherichia coli isolates. Our findings were comparable to studies by Vinod Kumar CS et al 27 and Malakan R E et al 28. The Gram positive isolates were having better susceptibility to Amikacin, Cephalosporins and Ciprofloxacin; but were more resistant to Ampicillin and Gentamicin in the present study. They showed high susceptibility to Linezolid and Vancomycin. Our findings correlated with the studies by Aletayeb SMH et al 16, Mane AK et al 3, Roy I et al 11 and Bhat R et al 29. Conclusion From our study we noticed that Gram negative bacteria were more commonly the cause of septicemia in neonates, and Klebsiella pneumoniae was the predominant pathogen. We also noticed that these Gram negative bacteria were resistant to routinely used antibiotics, hence their resistant pattern should be considered essential before deciding the empirical treatment. The higher antibiotics such as Colistin and Meropenem should be reserved for multi-drug resistant Gram negative bacteria, where as Linezolid and Vancomycin should be reserved for drug resistant Gram positive isolates. The positive blood culture with antibiotic sensitivity of the isolated organism(s) is the best guide to antimicrobial therapy, as resistance to antibiotics is a worldwide problem that causes ineffectiveness of empirical treatment. More so, strict infection control practices combined with judicious use of antibiotic therapy are the main solutions to this problem. However, it will be important to continue the surveillance of neonatal septicaemia in order to closely follow changes in trends and identify risk factors, to obtain information for empiric antibiotic therapy and to act rapidly in case of major changes in susceptibility patterns. Acknowledgments: None Conflict of interest: None References 1. Agnihotri N, Kaistha N, Gupta V. Antimicrobial susceptibility of isolates from neonatal septicemia. Jpn J Infect. Dis. 24; 57: Wynn J, Cornell TT, Wong HR, Shanley TP, Wheeler DS. The host response to sepsis and developmental impact. Paediatrics 2; 125(5): Mane AK, Nagdeo NV, Thombare VR. Study of neonatal septicemia in a tertiary care hospital in rural Nagpur. Journal of Recent Advances in Applied Sciences 2; 25: Nwadioha SI, Nwokedi EOP, Kashibu E, Odimayo MS, Okwori EE. A review of bacterial isolates in blood cultures of children with suspected septicaemia in a Nigerian tertiary hospital. African Journal of Microbiology Research 2; 4(4): Collee JG and Marr W. of Bacteria. In: Mackie & McCartney Practical Medical Microbiology, th ed, Collee JG, Fraser AG, Marmion BP, Simmons A (Editors), Churchill Livingstone-Elsevier, pp , Trevino S and Ross D. Bacteremia and sepsis. In: Textbook of Diagnostic Microbiology, 3 rd ed, Mahon CR, Lehman DC, Manuselis G (Editors), Saunders Elsevier, pp , Betty A, Forbes, Daniel F, Sahm Alice S Weissfeld. Bloodstream infections. In: Bailey & Scott s Diagnostic Microbi- 7

7 Mustafa M et al. ology, 12 th ed, Fabiano K, Sarahly L, Ellen Wurm (Editors), Mosby Elsevier, USA, pp , Luis Fernando PGL, Marı a RGJ, Noyola DE. Nosocomial bacteremia in children: a -year experience at a general hospital in Mexico. Infection Control and Hospital Epidemiology 27l; 28(4): Hindler JF and Jorgensen JH. Antimicrobial susceptibility testing. In: Textbook of Diagnostic Microbiology, 3 rd ed, Mahon CR, Lehman DC, Manuselis G (Editors), Saunders Elsevier, pp , 27.. Dixit JV. Tests of significance. In: Principles and Practice of Biostatistics, 3 rd ed, Dixit JV (editor), Banarsidas Bhanot Publication, Jabalpur, India, pp , Roy I, Jain A, Kumar M, Agarwal SK. Bacteriology of neonatal septicemia in a tertiary care hospital of Northern India. Indian Journal of Medical Microbiology 22; 2 (3): Kayange N, Kamugisha E, Mwizamholya DL, Jeremiah S, Mshana SE. Predictors of positive blood culture and deaths among neonates with suspected neonatal sepsis in a tertiary hospital, Mwanza-Tanzania. BMC Pediatrics 2; : Karthikeyan G and Premkumar K. Neonatal sepsis: Staphylococcus aureus as the predominant pathogen. Indian J Pediatr 21; 68(8): Begum S, Baki MA, Kundu GK, Islam I, Kumar M, Haque A. Bacteriological profile of neonatal sepsis in a tertiary hospital in Bangladesh. J Bangladesh Coll Phys Surg 212; 3: Shrestha NJ, Subedi KU, Rai GK. Bacteriological profile of neonatal sepsis: A hospital based study. J. Nepal Paediatr. Soc. 211; 31(1): Aletayeb SMH, Khosravi AD, Dehdashtian M, Kompani F, Mortazavi SM, Aramesh MR. Identification of bacterial agents and antimicrobial susceptibility of neonatal sepsis. African Journal of Microbiology Research 211; 5(5): Khatua SP, Das AK, Chatterjee BD, Khatua S, Ghose B, Saha A. Neonatal septicemia. Indian J Pediatr 1986; 53 (4): Waseem R, khan M, Izhar TS, Qureshi AW. Neonatal sepsis. Professional Med J 25; 12(4): Al-Shamahy HA, Sabrah AA, Al-Robasi AB, Naser SM. Types of bacteria associated with neonatal sepsis in Al- Thawra University Hospital, Sana, Yemen and their antimicrobial profile. SQU Med J 212; 12(1): Karambin MM and Zarkesh M. Enterobacter the most common pathogen of neonatal septicemia in Rasht, Iran. Iran J Pediatr 211; 21(1): Shrestha P, Das BK, Bhatta NK, Jha DK, Das B, Setia A, Tiwari A. Clinical and bacteriological profile of blood culture positive sepsis in newborns. J. Nepal. Pediatr. Soc. 27; 27(2): National Neonatal Perinatal Database report. (Last accessed on October 22, 213) 23. Sundaram V, Kumar P, Dutta S, Mukhopadhay K, Ray P, Gautam V, Narang A. Blood culture confirmed bacterial sepsis in neonates in a North Indian tertiary care center: Changes over the last decade. Jpn. J. Infect. Dis. 29; 62: Kumar GD, Ramachandran VG, Gupta P. Bacteriological analysis of blood culture isolates from neonates in a tertiary care hospital in India. J Health Popul Nutr 22; 2(4): Mathur M, Shah H, Dixit K, Khambadkone S, Chakrapni A, Irani S. Bacteriological profile of neonatal septicemic cases (for the year ) J. Post Grad. Med. 1994; 4(1): Mutlu M, Aslan Y, Saygin B, Yilmaz G, Bayramoglu G, Koksal I. Neonatal sepsis caused by gram negative bacteria in a neonatal intensive care unit: Asix year analysis. HK J Paediatr 211; 16: Vinod Kumar CS, Kalappanavar NK, Umakanth Patil, Basavarajappa KG. Change in spectrum of microbial aetiology in relation to gestational age and birth weight and emergence of ESBL in tertiary neonatal intensive care units. Int Bio Med Res 211; 2(3): Malakan RE and Momtazmanesh N. Neonatal sepsis due to Klebsiella: frequency, outcome and antibiotic sensitivity. Iranian J Publ Health 24; 33(2): Bhat R and Baby LP. Early onset of neonatal sepsis: Analysis of the risk factors and the bacterial isolates by using the BacT Alert system. Journal of Clinical and Diagnostic Research 211; 5(7):