Research Article Neonatal Meningitis by Multidrug Resistant Elizabethkingia meningosepticum Identified by 16S Ribosomal RNA Gene Sequencing

Similar documents
Prevalence of Metallo-Beta-Lactamase Producing Pseudomonas aeruginosa and its antibiogram in a tertiary care centre

Prevalence of Extended Spectrum Beta- Lactamase Producers among Various Clinical Samples in a Tertiary Care Hospital: Kurnool District, India

Antimicrobial utilization: Capital Health Region, Alberta

ESBL Producers An Increasing Problem: An Overview Of An Underrated Threat

The Basics: Using CLSI Antimicrobial Susceptibility Testing Standards

GENERAL NOTES: 2016 site of infection type of organism location of the patient

Antimicrobial Susceptibility Testing: Advanced Course

Acinetobacter species-associated infections and their antibiotic susceptibility profiles in Malaysia.

Compliance of manufacturers of AST materials and devices with EUCAST guidelines

Research Article Risk Factors Associated with Vancomycin-Resistant Enterococcus in Intensive Care Unit Settings in Saudi Arabia

Detection and Quantitation of the Etiologic Agents of Ventilator Associated Pneumonia in Endotracheal Tube Aspirates From Patients in Iran

Antibiotic Resistance in Pseudomonas aeruginosa Strains Isolated from Various Clinical Specimens

Antimicrobial Susceptibility Profile of E. coli Isolates Causing Urosepsis: Single Centre Experience

Antimicrobial stewardship in managing septic patients

Prevalence and Susceptibility Profiles of Non-Fermentative Gram-Negative Bacilli Infection in Tertiary Care Hospital

2012 ANTIBIOGRAM. Central Zone Former DTHR Sites. Department of Pathology and Laboratory Medicine

European Committee on Antimicrobial Susceptibility Testing

Suggestions for appropriate agents to include in routine antimicrobial susceptibility testing

ESBL- and carbapenemase-producing microorganisms; state of the art. Laurent POIREL

Antimicrobial Susceptibility Patterns of Salmonella Typhi From Kigali,

a. 379 laboratories provided quantitative results, e.g (DD method) to 35.4% (MIC method) of all participants; see Table 2.

Bacterial Pathogens in Urinary Tract Infection and Antibiotic Susceptibility Pattern from a Teaching Hospital, Bengaluru, India

Can we trust the Xpert?

EUCAST recommended strains for internal quality control

JOURNAL OF CLINICAL AND DIAGNOSTIC RESEARCH

21 st Expert Committee on Selection and Use of Essential Medicines Peer Review Report Antibiotics Review

Available online at ISSN No:

Clinical Characteristics, Antimicrobial Susceptibilities, andoutcomesofpatientswithchryseobacterium indologenes Bacteremia in an Intensive Care Unit

European Committee on Antimicrobial Susceptibility Testing

THE NAC CHALLENGE PANEL OF ISOLATES FOR VERIFICATION OF ANTIBIOTIC SUSCEPTIBILITY TESTING METHODS

PIPERACILLIN- TAZOBACTAM INJECTION - SUPPLY PROBLEMS

Florida Health Care Association District 2 January 13, 2015 A.C. Burke, MA, CIC

CONTAGIOUS COMMENTS Department of Epidemiology

Compliance of manufacturers of AST materials and devices with EUCAST guidelines

What s new in EUCAST methods?

These recommendations were approved for use by the Pharmaceutical and Therapeutics Committee, RCWMCH on 1 February 2017.

Helen Heffernan and Rosemary Woodhouse Antibiotic Reference Laboratory

ACINETOBACTER SPECIES: PHENOTYPIC CHARACTERIZATION AND ANTIMICROBIAL RESISTANCE

Mercy Medical Center Des Moines, Iowa Department of Pathology. Microbiology Department Antibiotic Susceptibility January December 2016

Help with moving disc diffusion methods from BSAC to EUCAST. Media BSAC EUCAST

Routine internal quality control as recommended by EUCAST Version 3.1, valid from

Pneumococci & streptococci Testing and clinical implications of susceptibility changes

BACTERIOLOGICAL PROFILE AND ANTIMICROBIAL SUSCEPTIBILITY PATTERN OF ISOLATES OF NEONATAL SEPTICEMIA IN A TERTIARY CARE HOSPITAL

2010 ANTIBIOGRAM. University of Alberta Hospital and the Stollery Children s Hospital

Understanding the Hospital Antibiogram

ESCMID Online Lecture Library. by author

International Journal of Health Sciences and Research ISSN:

Lack of Change in Susceptibility of Pseudomonas aeruginosa in a Pediatric Hospital Despite Marked Changes in Antibiotic Utilization

Identification And Speciation Of Acinetobacter And Their Antimicrobial Susceptibility Testing

Int.J.Curr.Microbiol.App.Sci (2017) 6(11):

Comparison of Antibiotic Resistance and Sensitivity with Reference to Ages of Elders

2015 Antimicrobial Susceptibility Report

Recommendations for Implementation of Antimicrobial Stewardship Restrictive Interventions in Acute Hospitals in Ireland

INCIDENCE OF BACTERIAL COLONISATION IN HOSPITALISED PATIENTS WITH DRUG-RESISTANT TUBERCULOSIS

Safe Patient Care Keeping our Residents Safe Use Standard Precautions for ALL Residents at ALL times

International Journal of Pharma and Bio Sciences ANTIMICROBIAL SUSCEPTIBILITY PATTERN OF ESBL PRODUCING GRAM NEGATIVE BACILLI ABSTRACT

EARS Net Report, Quarter

Antimicrobial Resistance Surveillance from sentinel public hospitals, South Africa, 2013

Int.J.Curr.Microbiol.App.Sci (2017) 6(3):

Aerobic Bacterial Profile and Antimicrobial Susceptibility Pattern of Pus Isolates in a Tertiary Care Hospital in Hadoti Region

2009 ANTIBIOGRAM. University of Alberta Hospital and the Stollery Childrens Hospital

North West Neonatal Operational Delivery Network Working together to provide the highest standard of care for babies and families

Antimicrobial Susceptibility Testing: The Basics

Antibiotic Usage and Microbial Resistance: Indian Scenario

Interactive session: adapting to antibiogram. Thong Phe Heng Vengchhun Felix Leclerc Erika Vlieghe

Detection of ESBL Producing Gram Negative Uropathogens and their Antibiotic Resistance Pattern from a Tertiary Care Centre, Bengaluru, India

Antibiotic Susceptibility of Common Bacterial Pathogens in Canine Urinary Tract Infections

Drive More Efficient Clinical Action by Streamlining the Interpretation of Test Results

Concise Antibiogram Toolkit Background

ENTEROCOCCI. April Abbott Deaconess Health System Evansville, IN

Evaluation of a computerized antimicrobial susceptibility system with bacteria isolated from animals

National Surveillance of Antimicrobial Resistance in Pseudomonas aeruginosa Isolates Obtained from Intensive Care Unit Patients from 1993 to 2002

Antibiotic. Antibiotic Classes, Spectrum of Activity & Antibiotic Reporting

Childrens Hospital Antibiogram for 2012 (Based on data from 2011)

Brief reports. Decreased susceptibility to imipenem among penicillin-resistant Streptococcus pneumoniae

Case Report Multidrug-Resistant Bacteroides fragilis Bacteremia in a US Resident: An Emerging Challenge

Volume-7, Issue-2, April-June-2016 Coden IJABFP-CAS-USA Received: 5 th Mar 2016 Revised: 11 th April 2016 Accepted: 13 th April 2016 Research article

Introduction. Antimicrobial Usage ESPAUR 2014 Previous data validation Quality Premiums Draft tool CDDFT Experience.

Comparative Assessment of b-lactamases Produced by Multidrug Resistant Bacteria

Antibiotic susceptibility pattern of Pseudomonas aeruginosa at the tertiary care center, Dhiraj Hospital, Piparia, Gujarat

BACTERIOLOGICALL STUDY OF MICROORGANISMS ON MOBILES AND STETHOSCOPES USED BY HEALTH CARE WORKERS IN EMERGENCY AND ICU S

Educating Clinical and Public Health Laboratories About Antimicrobial Resistance Challenges

Research Article. Drug resistance pattern of Pseudomonas aeruginosa isolates at PIMS Hospital, Islamabad, Pakistan

SMART WORKFLOW SOLUTIONS Introducing DxM MicroScan WalkAway System* ...

Antimicrobial Cycling. Donald E Low University of Toronto

Detection of inducible clindamycin resistance among clinical isolates of Staphylococcus aureus in a tertiary care hospital

Detection of Inducible AmpC β-lactamase-producing Gram-Negative Bacteria in a Teaching Tertiary Care Hospital in North India

PROTOCOL for serotyping and antimicrobial susceptibility testing of Salmonella test strains

International Journal of Pharma and Bio Sciences BACTERIOLOGICAL PROFILE OF BACTERIAL MENINGITIS AT TERTIARY CARE HOSPITAL IN NORTH KARNATAKA.

The UK 5-year AMR Strategy - a brief overview - Dr Berit Muller-Pebody National Infection Service Public Health England

Hospital ID: 831. Bourguiba Hospital. Tertiary hospital

Lab Exercise: Antibiotics- Evaluation using Kirby Bauer method.

Ophthalmology Research: An International Journal 2(6): , 2014, Article no. OR SCIENCEDOMAIN international

Antimicrobial susceptibility

PrevalenceofAntimicrobialResistanceamongGramNegativeIsolatesinanAdultIntensiveCareUnitataTertiaryCareCenterinSaudiArabia

Int.J.Curr.Microbiol.App.Sci (2017) 6(11):

RCH antibiotic susceptibility data

BACTERIOLOGICAL PROFILE OF OSTEOMYELITIS IN A TERTIARY CARE HOSPITAL AT VISAKHAPATNAM, ANDHRA PRADESH

Research Article Antibiotic Susceptibility Patterns of Bacterial Isolates from Pus Samples in a Tertiary Care Hospital of Punjab, India

Detecting / Reporting Resistance in Nonfastidious GNR Part #2. Janet A. Hindler, MCLS MT(ASCP)

Transcription:

International Pediatrics, Article ID 918907, 4 pages http://dx.doi.org/10.1155/2014/918907 Research Article Neonatal by Multidrug Resistant Elizabethkingia meningosepticum Identified by 16S Ribosomal RNA Gene Sequencing V. V. Shailaja, 1 Ashok Kumar Reddy, 2 M. Alimelu, 3 and L. N. R. Sadanand 1 1 Department of Microbiology, Niloufer Hospital for Women and Children, Hyderabad 500004, India 2 GHR Micro Diagnostics, Hyderabad 500082, India 3 Department of Pediatrics, Niloufer Hospital for Women and Children, Hyderabad 500004, India Correspondence should be addressed to V. V. Shailaja; shailajavv@yahoo.co.in Received 11 November 2013; Accepted 18 December 2013; Published 9 February 2014 Academic Editor: Lavjay Butani Copyright 2014 V. V. Shailaja et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Clinical and microbiological profile of 9 neonates with meningitis by Elizabethkingia meningosepticum identified by 16S ribosomal gene sequencing was studied. All the clinical isolates were resistant to cephalosporins, aminoglycosides, trimethoprimsulfamethoxazole, β-lactam combinations, carbapenems and only one isolate was susceptible to ciprofloxacin. All the isolates were susceptible to vancomycin. Six of nine neonates died even after using vancomycin, based on susceptibility results. E. meningosepticum meningitis in neonates results in high mortality rate. Though the organism is susceptible to vancomycin in vitro, its efficacy in vivo is questionable and it is difficult to determine the most appropriate antibiotic for treating E. meningosepticum meningitis in neonates. 1. Introduction Elizabethkingia meningosepticum (formerly known as Chryseobacterium meningosepticum/flavobacterium meningosepticum) is a nonfermentative gram negative bacillus, ubiquitous in nature [1, 2]. E. meningosepticum causes meningitis, pneumonia, bacteremia, and sepsis in infants and pneumonia, endocarditis, postoperative bacteremia, and meningitis in adults [1 3]. Among the different infections, a high mortality and severe postinfection sequelae including hydrocephalus, deafness, and developmental delay have been reported in neonates with meningitis due to E. meningosepticum [2]. Infections caused by E. meningosepticum are difficult to treat because of its resistance to extended spectrum β-lactam agents and aminoglycosides [1 3]. In this study we report the clinical profile, antibiotic susceptibility, and treatment outcome of meningitis caused by multidrug resistant Elizabethkingia meningosepticum in neonates. 2. Materials and Methods Nine neonates with E. meningosepticum meningitis who presented to the Neonatal Intensive Care Unit of Niloufer Hospital for Women and Children, Hyderabad, India, between January 2009 and December 2010, were included in the study. Cerebrospinal fluid collected from the neonates was subjected to direct microscopic examination, inoculated on to blood agar, chocolate agar, and MacConkey s agar, and incubated overnight at 37 C. Blood cultures were done by automated blood culture systems (Bact/Alert, Biomerieux, France). The isolates were identified by conventional biochemical reactions and Vitek 2 (Biomerieux, France). The identity of the isolates was further confirmed by 16S rrna gene sequencing. Sequencing was performed (forward primer, 5 -TTGGAGAGTTTGATCCTGGCTC-3 ; reverse primer, 5 -GGACTACCAGGGTATCTAA-3 ) with fluorescence-labeled dideoxynucleotide terminators using an ABI 3130 Xl automated sequencer, following the

2 International Pediatrics Table 1: Antibiotic susceptibility and GenBank accession numbers of isolates. S. number GenBank accession number Antibiotic susceptibility AK/G CIP/OF CZ/CTX/CFP IM/MP PC PTB AC V SXT 1 HM042305 R R R R R R R S R 2 HM042306 R S R R R R R S R 3 HM130055 R R R R R R R S R 4 HM130056 R R R R R R R S R 5 HM130057 R R R R R R R S R 6 HM130058 R R R R R R R S R 7 HM130059 R R R R R R R S R 8 NS R R R R R R R S R 9 NS R R R R R R R S R PC: piperacillin; PTB: piperacillin-tazobactam; AK: ; G: gentamicin; CZ: ceftazidime; CTX: cefotaxime; CFP: cefepime; MP: meropenem; IM: imipenem; CP: ciprofloxacin; OF: ofloxacin; SXT: trimethoprim-sulfamethoxazole; V: vancomycin; R: resistant; S: sensitive; NS: not submitted in the GenBank. manufacturer s instructions (PE Applied Biosystems). The sequences were analysed and identified using the Megablast search program of the GenBank database. The sequence of the isolate perfectly (100%) matched the sequences of E. meningosepticum deposited in GenBank. The gene sequences of the isolates were deposited in the GenBank. Antibiotic susceptibility of the isolates was done by Kirby Bauer s disk diffusionmethodandalsobyvitek2. 3. Results and Discussion Gram s stain of CSF showed polymorphonuclear leukocytes and Gram negative bacilli in all the nine patients. Confluent growth of moist raised colonies was seen on blood and chocolate agar in all patients. Blood culture was collected in only one patient apart from CSF culture. Blood culture was positive and showed the growth of moist raised colonies on subculture on blood and chocolate agar. There was no growth on MacConkey s agar in all patients. All the isolates werenonmotile,andcatalaseandoxidasepositive,indole positive,citrateandureasenegative,ortho-nitrophenyl-betagalactoside positive, gelatin was liquefied after 48 hours; oxidative fermentative test was positive after 72 hours. All theisolates wereidentifiedase. meningosepticum by Vitek 2. Antibiotic susceptibility and GenBank accession numbers of theisolateswereshownintable 1. Clinicalfeaturesandtreatment outcome of the nine patients with E. meningosepticum meningitis are shown in Table 2. The data on antibiotic susceptibility of E. meningosepticum is limited because it is rarely isolated from clinical specimen and there are no standard guidelines on antibiotic susceptibility testing and reporting and interpretation of the susceptibility data. According to the published literature E. meningosepticum is known to be resistant to βlactams, extended spectrum cephalosporins, carbapenems, and gentamicin, susceptible to vancomycin, trimethoprimsulfamethoxazole, rifampicin, and ciprofloxacin, and moderately susceptible to piperacillin [2]. In the present study we have noted that all the isolates are resistant to β-lactams, extended spectrum cephalosporins, β-lactam combinations, carbapenems, aztreonam, aminoglycosides, tetracyclines, and trimethoprim-sulfamethoxazole and only one isolate has been susceptible to ciprofloxacin. All the isolates are susceptible to vancomycin by disk diffusion method. Determination of antibiotic susceptibility by disk diffusion is not a recommended method, but there is no option in Vitek to check the susceptibility of nonfermenting Gram negative bacilli to vancomycin. There is no discrepancy between the susceptibility results of the isolates by Vitek and disk diffusion to the remaining antibiotics. Antibiotic susceptibility data of our study highlights that the majority of isolates (8/9) are multidrug resistant (resistant to all drugs except vancomycin). The underlying host factors associated with E. meningosepticum meningitis in neonates are prematurity and low birth weight and we also observed the same risk factors [4, 5]. Based on the susceptibility of the isolates only to vancomycin, we have used vancomycin in 7/9 neonates and one neonate received combination of vancomycin and ciprofloxacin antibiotics. One neonate succumbed before the susceptibility results were available. Only two neonates recovered from infection after using vancomycin and the remaining 7 expired. According to the previous reports vancomycin is not an effective antimicrobial agent to treat the E. meningosepticum meningitis [2, 6, 7]. Based on our study findings and other reports the efficacy of vancomycin in treating E. meningosepticum meningitis in neonates is questionable. Previous authors treated neonates with E. meningosepticum meningitis successfully with piperacillin in combination with rifampicin [5]. All our study isolates were resistant to piperacillin and piperacillin-tazobactam. The limitation of our study is that susceptibility to rifampicin is not determined. The mortality rate (6/9) in our study is high compared to other studies [5]. Several outbreaks of E. meningosepticum meningitis in neonates have been reported [8, 9]. The outbreaks reported intheliteratureoccurredwithinfewweekstomonthsexcept in one study, where the authors reported an outbreak with one strain of E. meningosepticum for 2 years [8]. All the nine cases reported in the present study occurred over a period of one year. We have tried to identify the source of infection in the present study by collecting environmental

International Pediatrics 3 Table 2: Clinical features and treatment outcome of nine neonates with meningitis. S. number Age (days)/sex Underlying condition Clinical features at presentation Clinical diagnosis 1 2/F Preterm baby Fever, seizures 2 17/F Preterm baby 3 15/F Preterm baby 4 7/F 5 21/M 6 16/F 7 30/M weight 8 22/M Preterm baby 9 10/F Fever, icterus, seizures icterus, vomiting fever, neck fever, Seizure, vomiting, neck Seizure, neck Not accepting feeds, seizures, Septicemia and meningitis Septicemia Septicemia and meningitis Initial antibiotic used before collection of specimen Amikacin Cefotaxime and Modified antibiotic therapy after microbiological diagnosis and ciprofloxacin before the susceptibility results were available Outcome Recovered Recovered Left against medical advise specimens like water from incubators, tap water, suction fluids, the disinfectants and healthy babies were also screened for asymptomatic carriage by collecting rectal and umbilical swabs. All the environmental specimens and healthy babies were negative for E. meningosepticum. We also carried out the gene sequencing of the isolates from seven patients and phylogenetic tree was constructed to see the genetic relatedness of the isolates (gene sequences of the isolates deposited in the GenBank) and found that none of the isolates are genetically related to each other. In the present study we couldnotidentifythesourceofinfection. 4. Conclusion E. meningosepticum meningitis in neonates results in high mortality rate. Though the organism shows susceptibility in vitro to vancomycin, its efficacy in vivo is questionable and it is difficult to determine the most appropriate antibiotic for treating E. meningosepticum meningitis in neonates. Conflict of Interests The authors declare that there is no conflict of interests regarding the publication of this paper. Acknowledgments The authors thank Hyderabad Eye Research Foundation, L. V. Prasad Eye Institute, Hyderabad, India, for allowing them to use the sequencing facility, and Mr. Praveen Kumar Balne for technical help. References [1] P.-Y. Lin, C. Chu, L.-H. Su, C.-T. Huang, W.-Y. Chang, and C.- H. Chiu, Clinical and microbiological analysis of bloodstream infections caused by Chryseobacterium meningosepticum in nonneonatal patients, Clinical Microbiology,vol.42, no.7,pp.3353 3355,2004. [2] J. T. Kirby, H. S. Sader, T. R. Walsh, and R. N. Jones, Antimicrobial susceptibility and epidemiology of a worldwide collection of Chryseobacterium spp.: report from the SENTRY antimicrobial surveillance program (1997 2001), Clinical Microbiology,vol.42,no.1,pp.445 448,2004. [3] N. Ozkalay, M. Anil, N. Agus, M. Helvaci, and S. Sirti, Community-acquired meningitis and sepsis caused by Chryseobacterium meningosepticum in a patient diagnosed with thalassemia major, Clinical Microbiology,vol.44,no. 8, pp. 3037 3039, 2006. [4] J. R. Dooley, L. J. Nims, and V. H. Lipp, of infants caused by Flavobacterium meningosepticum. Report of a patient

4 International Pediatrics and analysis of 63 infections, Tropical Pediatrics,vol. 26,no.1,pp.24 30,1980. [5]M.I.IssackandY.Neetoo, AnoutbreakofElizabethkingia meningoseptica neonatal meningitis in mauritius, Infection in Developing Countries, vol.5,no.12,pp.834 839, 2011. [6]M.C.DiPentima,E.O.MasonJr.,andS.L.Kaplan, In vitro antibiotic synergy against Flavobacterium meningosepticum: implications for therapeutic options, Clinical Infectious Diseases, vol. 26, no. 5, pp. 1169 1176, 1998. [7] S. L. Fraser and J. H. Jorgensen, Reappraisal of the antimicrobial susceptibilities of Chryseobacterium and Flavobacterium species and methods for reliable susceptibility testing, Antimicrobial Agents and Chemotherapy,vol.41,no.12,pp.2738 2741, 1997. [8] S. N. Hoque, J. Graham, M. E. Kaufmann, and S. Tabaqchali, Chryseobacterium (Flavobacterium) meningosepticum outbreak associated with colonization of water taps in a neonatal intensive care unit, Hospital Infection, vol. 47, no. 3, pp. 188 192, 2001. [9] S. Maraki, E. Scoulica, A. Manoura, N. Papageorgiou, C. Giannakopoulou, and E. Galanakis, A Chryseobacterium meningosepticum colonization outbreak in a neonatal intensive care unit, European Clinical Microbiology and Infectious Diseases,vol.28,no.12,pp.1415 1419,2009.

MEDIATORS of INFLAMMATION The Scientific World Journal Gastroenterology Research and Practice Diabetes Research International Endocrinology Immunology Research Disease Markers Submit your manuscripts at BioMed Research International PPAR Research Obesity Ophthalmology Evidence-Based Complementary and Alternative Medicine Stem Cells International Oncology Parkinson s Disease Computational and Mathematical Methods in Medicine AIDS Behavioural Neurology Research and Treatment Oxidative Medicine and Cellular Longevity