Contributing ideas: What did fossils tell Darwin? species have changed over time there used to be species on the planet that are no longer here

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So what's so great about Darwin anyway? biological evolution is change in species over time. this was not a new idea at the time but there were no good mechanisms to explain how these changes occurred natural selection is just such a mechanism, and this is what Darwin contributed. Contributing ideas: What did fossils tell Darwin? species have changed over time there used to be species on the planet that are no longer here Fossils Why don't we have fossils of all species? fossils are biased toward long existing, abundant species with hard shells or skeletons Paleontology Geologic changes Galapagos Islands Artificial selection Wallace coming up with the same idea at the same time Contributing ideas How fossils form What does this tell us? 1. All species did not exist at the same time 2. Species got more complex over time Sandstone showing layers that formed over millions of years The age of fossils can be estimated by comparing them to other fossils. The assumption is that fossils found in lower layers are older than fossils found in upper layers. Grand Canyon e.g., the Colorado River is eroding the Grand Canyon at about 0.3 m per millenium. The canyon is 1 800 m deep in places. How long would this take? 6 million years this made Darwin realize that the Earth was old enough for evolution to occur maybe slow and subtle processes over long periods of time can also act on living organisms, producing substantial change over a long period of time. Paleontology Geologic gradualism each species was slightly different from every other species they were also slightly different from the birds on the mainland What did he observe? 1. Organisms from temperate regions of South America were more similar to those from the tropics of South America than those from temperate regions of Europe. 2. South American fossils, though different from modern species, were more similar to modern species from South America than those from Europe. 3. Most of the animal species on the Galapagos lived nowhere else but they resembled species living on the South American mainland. How could this be? Maybe the islands had been colonized by plants and animals from the mainland that had then diversified on the different islands. Voyage of the Beagle Finch beaks 1

Model All these were created by artificial selection. Using the Brassica plant, farmers selected traits they wanted to enhance. 1. For each of the plants, which trait would a farmer select for? Brussels sprouts large lateral buds Cauliflower large flower heads Kohlrabi large stems Kale large leaves Broccoli large stems and buds Brussels sprouts large lateral buds 2. Looking at the graph, what is the normal size range in the Brassica plant for the relevant characteristic? Brussels sprouts 0.1 cm to 0.5 cm Cauliflower 6.5 cm to 8.4 Kohlrabi 1.5 cm to 2.5 cm Kale 10 cm to 12 cm Broccoli stems 1.5 to 2.5 cm and flower buds 6.5 cm to 8.4 cm 3. What is the range necessary for the plant to produce the vegetable? Brussels sprouts 2.5 cm to 4 cm Cauliflower 15.2 cm to 25.2 cm Kohlrabi 5 cm to 7.6 cm Kale 20 cm to 25.4 cm Broccoli stems 2 cm to 4 cm and flower buds 10 cm to 15.2 cm 4. Place the words 'humans' and 'nature' in the correct places for this statement. "In artificial selection, nature provides the variation, and humans select the variations that are found to be useful." 5. Describe what a farmer does when using artificial selection in plant breeding. The farmer chooses plants that have the most pronounced form of the desired trait and crosses those plants. He then chooses plants from the offspring that have the most pronounced form and so on. Artificial selection Artificial selection model Each living species has descended, with changes, from other species over time. In other words, all living species are related to one another. 1. What is evolution? Why is evolution referred to as a theory? 2. What does the fossil record tell us about evolution? Look back in time and you will find common ancestors shared by tigers, panthers, and cheetahs. Panthers Tigers 3. Why are fossils of many species not found in the fossil record? Cheetahs 4. What two ideas in geology were important for Darwin s thinking? Horses 5. How did his visit to the Galapagos Islands influence Darwin s thinking? Bats 6. a) What is artificial selection? How does it differ from natural selection? b) How did artificial selection influence Darwin s thinking? Dogs Reptiles Fishes Birds Common ancestor Look further back and you will find ancestors that these felines share with horses, dogs and bats. Farther back still are the common ancestors of mammals, birds, reptiles, and fishes. We can guess, then, that if we look back far enough, we will find the common ancestor of all living things. Descent with modification ininother otherwords... words... Natural selection requires three things: 1. variability gotta be different 2. heritability gotta pass it on 3. differential reproductive success gotta be better Let's elaborate... 1. Over production Most species produce way too many offspring but only a few survive. 2. Struggle for existence Organisms compete for limited Resources like food. 3. Variations No two individuals are exactly alike. Most variations are heritable so differences can be passed on to the next generation. 4. Survival of the fittest Individuals with traits that give them an advantage in the competition produce more offspring. This is called differential reproductive success. If your genes make you more successful than others, the next generation will have more of your genes than the genes of others. 5. Origin of new species Favorable traits will accumulate over time, possibly giving rise to new species. Darwin's phylogenetic tree Summary of points 2

It was evident that such facts as these, as well as many others, could only be explained on the supposition that species gradually became modified; and the subject haunted me. There is a grandeur in this view of life, with its several powers, having been originally breathed by the Creator into a few forms or into one; and that, whilst this planet has gone cycling on according to the fixed law of gravity, from so simple a beginning endless forms most beautiful and most wonderful have been, and are being evolved. Charles Darwin in On the Origin of Species. Caveman Joe Darwin Quotations Caveman Joe 7. How does the concept of descent with modification explain the variety of species observed today? 8. How would you summarize the main ideas in Darwin s theory? 9. How does natural variation affect evolution? Where does this variation come from? Gene determines one trait (e.g., hair color, whether you have freckles) 10. How is the process of natural selection related to a population s environment? 11. How does the process of natural selection account for the diversity of organisms that have appeared over time? What is being selected in the process? What is selecting it? 12. Distinguish between fitness and adaptation. Give an example of each. 13. How might natural selection have produced the modern giraffe from short necked ancestors? 14. a) How is the general understanding of survival of the fittest misleading? b) What do we mean when we describe an organism as more fit than some other organism? Mini Genetics Intro Mutation Simulation a change in the DNA of an individual this process is slow because mutations rates are low in plants and animals if passed on, however, it changes the gene pool immediately Imagine a lizard where the normal color is brown but a mutation produces red and black lizards. Population A Mate Population B red lizards might be more visible to predators black lizards might warm up faster and therefore get more food or avoid predators. Mutation Mate Mutation Mate no effect Mutation Mutation decreases fitness increases fitness Isolation lethal Evolution computer model If one of the populations becomes different enough, we can call it a new species. Mutations Populations exchange genes 3

15. What role do mutations play in evolution? BARRIER 16. How does sexual reproduction benefit a species? Common ancestor If two populations are unable to share genes, eventually, a population may become different enough that we call if a different species. This can happen in one of two general ways: In allopatric speciation, geographic barriers can lead to the origin of a new species. In sympatric speciation, speciation occurs in geographically overlapping populations when biological factors reduce the exchange of genes between the two groups. Either way, the key is that two populations are no longer able to exchange genes. There are some specific ways this can happen. A 1. Habitat isolation species may occupy different habitats S 2. Temporal isolation species may breed at different times S 3. Behavioural isolation a courtship ritual might be unique to a species S 4. Mechanical isolation actual physical differences might preclude mating S 5. Gametic isolation sperm of one species might be unable to fertilize eggs of another S 6. Reduced hybrid fertility hybrids might be sterile Mechanisms of Speciation Habitat isolation Bird of paradise Eastern spotted skunk mates in late winter. Western spotted skunk mates in late summer. Eastern meadowlark Western meadowlark Although they look quite similar, differences in their songs prevent mating after the introduction of apples in the 19th C, a population of flies arose that mated and matured a little earlier Blue footed booby they colonized apple trees and began to feed and breed on them because apple trees mature more quickly, natural selection is favoring flies that develop earlier research has shown that the two rarely interbreed Hawthorne fly (North American apple maggot fly) this is speciation in progress Temporal isolation Behavioural isolation 4

Gametes of the red and purple sea urchins are unable to fuse. Although many species of coral release gametes at the same time, they rarely hybridize because the gametes are incompatible. Mechanical isolation Gametic isolation 17. What term describes each of the following? a) Two species may live in the same area but in different habitats. Since there is little if any contact the possibility of successfully mating is drastically reduced. b) Since the breeding times of similar organisms are different there is no chance of reproductive contact. c) Birds, mammals, and insects have pre mating rituals that attract the proper mate. d) A physical barrier separates a species into two separate areas and does not allow any further contact. 18. How did the breakup of Pangea and then of Gondwana contribute to the variety of species? = + 19. Predict what may eventually happen to two snail populations living on either side of a road. 20. How can a population not separated geographically, diverge into two separate species? (sterile) Reduced hybrid fertility What is the evidence? 1. Homologous structures embryology vestigial structures What field of science does the evidence come from? Embryology 2. Comparative anatomy 3. Molecular similarity Molecular biology 4. Biogeography Geology 5. The fossil record Archaeology 6. Transitional fossils Paleontology Bird Evidence Homologous structures 5

Many species of snakes and legless lizards initially develop limb buds in their embryonic development, only to reabsorb them before hatching Hind legs, complete with various developing leg bones, nerves, and blood vessels, temporarily appear in the fetal whales, dolphins, and porpoises and subsequently degenerate before birth. Reptiles and birds lay eggs, and the emerging young use either an "egg tooth" to cut through a leathery eggshell (as found in lizards and snakes) or a specialized structure, called a caruncle, to crack their way out of a hard calcerous eggshell (as found in turtles and birds). Monotremes, such as the platypus and echidna, are primitive mammals that have both an egg tooth and a caruncle, even though the monotreme eggshell is thin and leathery. During marsupial development, an eggshell forms transiently and then is reabsorbed before live birth. Though they have no need to hack through a hard egg shell, several marsupial newborns (such as baby Brushtail possums, koalas, and bandicoots) retain a vestigial caruncle. Comparative embryology Pelvic girdle Vestigial structure homologous structures of organisms which have seemingly lost all or most of their original function in a species through evolution. e.g., flightless birds and moths and non functional eyes in cavefish human tailbones muscles that move the ears (humans and higher primates) wisdom teeth palmar grasp reflex body hair goose bumps semilunar muscle and nictitating membrane in the human eye the pelvic girdle of whales, dolphins, and snakes etc. (Crocodile) Shark swimming Dolphin swimming Vestigial structures Comparative anatomy All vertebrates have a similar skeletal plan. fused bones form a skull to protect the brain most have two pairs of limbs (forelimbs) 21. a) Explain the difference between homologous and analogous. Give examples of each. b) How could two analogous structures arise? vertebrae protect the spinal cord ribs extend from some vertebrae to protect internal organs 22. What can we learn about evolution from looking at the embryos of vertebrates? 23. What is meant by the term vestigial structure? How do they provide evidence of evolution? (hindlimbs) Vertebrate skeleton 6

Human Chimp Gorilla Orangutan if mutations happen randomly, what do you predict we should see as time passes? the more time that has passed since divergence of the two species, the more differences we see should see in the gene Differences in gene for cytochrome c The genetic code is universal. you can take a gene from one species and put it in another and it does the same thing Evidence from genes: Giant pandas have all the genes for meat digestion but they do not work. They have no genes for digesting plants. the gene for the enzyme that synthesizes vitamin C is present in humans and other primates but doesn't work genes for the sense of smell in humans and dolphins Molecular evidence Primate chromosomes closely related species tend to be found in the same geographic region, while species in similar habitats in distant places are very different if species were designed for their habitats, we would expect to find similar species in similar habitats but this is not the case the distance between Bali and Lombok is only 35 km west of the line are found organisms related to Asiatic species east, a mixture of species of Asian and Australian origin is present environments are the same but the species are different and related to those on the nearest mainland Marsupials are not found in the Pacific Ocean, nor on the Asian mainland. How could they have reached their present habitats? Fossils of marsupials have been found in the Antarctic as well as in South America and Australia. When Gondwana existed, marsupials were able to spread by riding the continents as they separated. Primate cladogram Biogeography 24. a) If you looked at the DNA of two closely related species, what would you expect to find? b) What can be learned through protein comparisons of two different species? Give an example. 25. How can two species that look very different from each other be more closely related than two species that look similar to each other? Do we actually see this anywhere? The next Hawaiian island is building on the seafloor southeast of Kilauea. It s top is 1000 m below the water surface, and it will break the surface in the next 10,000 to 100,000 years. Is it still happening? It's already named Loihi. Tectonic Plates 7

the oldest fossils are single celled organisms these are dated to 3.5 BYA fossils of simple multicellular organisms are the next youngest fossils of more complex organisms are the youngest Basilosaurus From Green Head, Saint John Stromatolites Transitional fossils 375 MYA had not only gills and scales but traits of a tetrapod, including limblike fins, ribs, a flexible neck, and a croc shaped head basic wrist bones and simple fingers show that the fins were weight bearing. Tiktaalik: The "Fishapod" Whale evolution Tiktaalik 245 MYA almost perfect intermediate between mammals and reptiles cat sized burrower that had scales and laid eggs like mammals, it had whiskers, warm blood, and, scientist suspect, a fur coat. 150 to 145 MYA shares features with meat eaters and birds jaws with sharp teeth three fingers with claws long bony tail hyperextensible second toes ("killing claw") feathers (which suggest homeothermy) Archaeopteryx: The First Bird Thrinaxodon: The Emerging Mammal Archaeopteryx Thrinaxodon 8

Did horse evolution have a goal? 26. Currently, health officials worldwide are becoming more and more concerned that bacteria are becoming resistant to antibiotics. How can this resistance be evolving? 27. Is protecting endangered species upsetting the process of natural selection? Was this the goal of horse evolution? Nope. It's just what we ended up with. Horse evolution 9

Attachments Crocodile nictitating membrane.mp4 Natural selection.jar Mating ritual Bird of paradise.flv Mating Ritual Blue Footed Booby.flv